BIO ALGEBRA OF LIVING ORGANISMS

(Bio Mathematical Lab of Sikander Aqeel) 

CHAPTER [3] PROTEINS  

Proteins  

(3/24/2016) 

Amino Acid Composition of Proteins:  

It is amazing that all the different types of proteins are initially synthesized as polymers of only 20 amino acids, known as the common amino acids, the common amino acids are defined as those amino acids for which a specific codon exists in the DNA genetic code, there are 20 amino acids for which DNA codon are known, the process of the reading of the DNA code, resulting in the polymerization of amino acids of a specific sequence into the proteins based on the DNA code, In this chapter we shall discus only the protein of this genetically controlled synthetic process,  

For example 

Arginine = C6H14N4O2 = 177.5 m/g 

Arginine = CGU, CGC, CGA, CGG, AGA, AGG = mRNA Codons 

(GUANINE)

  = a2 + b2 = c2 (Guanine)

  = a2 = Arginine and b2 = Guanine = c2 

  = a2 = 177.5 m/g and b2 = 151.13 g/mol = c2 

  = a177.5 + b151.13 = c2 

  = 31506.25 + 22840.2769 = c2 

  = a + b = 54346.5269 = c2             

  = a + b = 54346.5269 / 44.950 (COO- + H0.9) = 1209.04

  = a + b = 1209.04 / 151.13 (G) = 8 

  = a + b = 8 Guanine from Arginine polymerization, 

mRNA Arginine Basic = 8 Guanine 

tRNA Arginine Basic = 0 Guanine 

(CYTOSINE)

  = a2 + b2 = c2 (Cytosine)

  = a2 = Arginine and b2 = Cytosine = c2 

  = a2 = 177.5 m/g and b2 = 111.1 g/mol = c2 

  = a177.5 + b111.1 = c2 

  = 31506.25 + 12343.21 = c2 

  = a + b = 43849.46 = c2  

  = a + b = 43849.46 / 78.936 (COOH + H1 + CH2 + NH3) = 555.5

  = a + b = 555.5 / 111.1 (C) = 5 

  = a + b = 5 Cytosine from Arginine polymerization,

mRNA Arginine Basic = 5 Cytosine 

tRNA Arginine Basic = 0 Cytosine 

(URACIL)

  = a2 + b2 = c2 (Uracil)

  = a2 = Arginine and b2 = Uracil = c2 

  = a2 = 177.5 m/g and b2 = 112.0868 g/mol = c2 

  = a177.5 + b112.0868 = c2 

  = 31506.25 + 12563.45073424 = c2 

  = a + b = 44069.70073424 = c2  

  = a + b = 44069.70073424 / 393.479 (2C6H12O6 + N2) = 112

  = a + b = 112 / 112 (U) = 1 

  = a + b = 1 Uracil from Arginine polymerization,  

mRNA Arginine Basic = 1 Uracil 

tRNA Arginine Basic = 0 Uracil 

(ADENINE)

  = a2 + b2 = c2 

  = a2 = Arginine and b2 = Adenine = c2 

  = a2 = 177.5 m/g and b2 = 135.13 g/mol = c2 

  = a177.5 + b135.13 = c2 

  = 31506.25 + 18260.1169 = c2 

  = a + b = 49766.3669 = c2  

  = a + b = 49766.3669 / 92.07 (2CHOH + N2) = 540.52

  = a + b = 540.52 / 135.13 (A) = 4 

  = a + b = 4 Adenine from Arginine polymerization,  

mRNA Arginine Basic = 4 Adenine 

tRNA Arginine Basic = 0 Adenine 

Total Codons = G8 + C5 + U1 + A4 = 18

Arginine = CGU, CGC, CGA, CGG, AGA, AGG = mRNA Codons

There are 20 amino acids for which mRNA codon are known, the process of the reading of the mRNA code, resulting in the polymerization of amino acids of a specific sequence into the proteins based on the mRNA code,  

The genetically controlled synthetic process =

= (COO- + H1) or (CH3 – CH – CH3) 

= (COOH + H1 + CH2 + NH3)

= (2C6H12O6 + N2) 

= (2CHOH + N2) 

Main Functions of Arginine:

Essential for normal immune system activity = (COOH + H1 + CH2 + NH3)

Necessary for wound healing = (COOH + H1 + CH2 + NH3)

Assists with regeneration of damaged liver = (2C6H12O6 + N2)

Necessary for production and release of growth hormone = (COOH + H1 + CH2 + NH3)

Increases release of insulin and glucagon = (2C6H12O6 + N2) 

Arginine is the most potent amino acid in releasing insulin = (2CHOH + N2) 

Assists in healing through collagen synthesis = (2C6H12O6 + N2)

Precursor to GABA, an important inhibitory neurotransmitter

Decreases size of tumors. (2C6H12O6 + N2) + (2CHOH + N2) 

Necessary for **atogenesis = (COO- + H1) or (CH3 – CH – CH3) 

The Uracil has most large amount of compounds (2C6H12O6 + N2), from reason of triplet (Phenylalanine)